STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3T1U1_LOXAFTNFR-Cys domain-containing protein. (447 aa)    
Predicted Functional Partners:
TNFSF8
Tumor necrosis factor ligand 3A; Belongs to the tumor necrosis factor family.
    
 0.994
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.836
TRAF5
TNF receptor-associated factor.
    
 0.773
TRAF1
TNF receptor-associated factor.
    
 0.771
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.771
TNFRSF4
TNF receptor superfamily member 4.
   
  
 0.693
RUBCNL
Rubicon like autophagy enhancer.
      
 0.630
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
      
 0.617
CD5
CD5 molecule.
      
 0.602
TNFRSF9
TNF receptor superfamily member 9.
      
 0.590
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.