STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG2AAutophagy related 2A. (1912 aa)    
Predicted Functional Partners:
WIPI1
WD repeat domain, phosphoinositide interacting 1.
    
 0.982
WIPI2
WD repeat domain, phosphoinositide interacting 2.
    
 0.976
ULK2
Protein kinase domain-containing protein.
   
 0.965
ATG2B
Autophagy related 2B.
  
 
0.919
ULK1
Unc-51 like autophagy activating kinase 1.
   
 
 0.687
G3UJ34_LOXAF
DUF3543 domain-containing protein.
   
 
 0.673
ATG9A
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 
 0.667
NBR1
NBR1 autophagy cargo receptor.
      
 0.659
ULK3
Unc-51 like kinase 3.
   
 
 0.605
PDIK1L
PDLIM1 interacting kinase 1 like; Belongs to the protein kinase superfamily.
   
 
 0.586
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.