STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFDP1Craniofacial development protein 1; May play a role during embryogenesis. (298 aa)    
Predicted Functional Partners:
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 
 0.948
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 
 0.944
VPS72
Vacuolar protein sorting 72 homolog.
   
 
 0.875
RUVBL2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.865
YEATS4
YEATS domain containing 4.
   
 
 0.839
H2AZ2
Histone H2A; Belongs to the histone H2A family.
    
 
 0.763
H2AZ1
Histone H2A; Belongs to the histone H2A family.
    
 
 0.763
EP400
E1A binding protein p400.
    
 
 0.761
SRCAP
Uncharacterized protein.
    
 
 0.761
TMEM170A
Uncharacterized protein.
 
    
 0.757
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.