STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFDP1Craniofacial development protein 1; May play a role during embryogenesis. (298 aa)    
Predicted Functional Partners:
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.944
SRCAP
Uncharacterized protein.
    
 0.938
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.926
RUVBL2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.898
EP400
E1A binding protein p400.
    
 0.894
VPS72
Vacuolar protein sorting 72 homolog.
   
 
 0.878
YEATS4
YEATS domain containing 4.
   
 
 0.875
ACTR6
Actin related protein 6; Belongs to the actin family.
   
 
 0.833
ACTL6A
Actin like 6A; Belongs to the actin family.
    
 0.791
CFAP221
Cilia and flagella associated protein 221.
    
 
 0.777
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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