STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100675403Sulfotransferase; Belongs to the sulfotransferase 1 family. (398 aa)    
Predicted Functional Partners:
KERA
Keratocan.
     
 0.808
CHST2
Sulfotransferase; Belongs to the sulfotransferase 1 family.
     
  0.774
LUM
Lumican.
     
 0.726
B3GNT7
Hexosyltransferase.
      
 0.618
CHST1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
 0.583
CHST3
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
 0.581
OGN
Osteoglycin.
     
 0.556
CHST13
Carbohydrate sulfotransferase.
   
  
 0.522
CHST9
Carbohydrate sulfotransferase.
   
  
 0.520
WDR64
WD repeat domain 64.
   
  
 0.518
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.