STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JAMLIg-like domain-containing protein. (178 aa)    
Predicted Functional Partners:
CXADR
Uncharacterized protein.
   
 0.968
PLXNB2
Sema domain-containing protein.
      
 0.497
IL17A
Interleukin 17A.
      
 0.480
SCN2B
Sodium voltage-gated channel beta subunit 2.
 
      0.479
GRAMD1C
GRAM domain containing 1C.
    
 0.452
GRAMD1A
GRAM domain containing 1A.
    
 0.452
GRAMD2A
GRAM domain containing 2A.
    
 0.452
GRAMD2B
GRAM domain containing 2B.
    
 0.452
SCN1B
Sodium voltage-gated channel beta subunit 1.
    
 0.452
GRAMD1B
GRAM domain containing 1B.
    
 0.452
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.