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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3T1W9_LOXAFSH3 domain-containing protein. (668 aa)    
Predicted Functional Partners:
MYO15B
Uncharacterized protein.
 
      0.899
WHRN
Whirlin.
    
 0.808
G3SR10_LOXAF
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
   
 0.747
USH1G
USH1 protein network component sans.
   
 0.681
G3TGF4_LOXAF
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
 
 
 0.665
USH1C
USH1 protein network component harmonin.
   
 0.635
G3TBG1_LOXAF
WH2 domain-containing protein.
   
 0.609
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.596
EPS8L2
EPS8 like 2.
   
 0.585
ESPNL
Espin like.
   
 0.558
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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