STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAN2B1-2Alpha-mannosidase. (995 aa)    
Predicted Functional Partners:
MAN2C1
Mannosidase alpha class 2C member 1.
     
 0.930
G3U8F0_LOXAF
Glyco_hydro38C2 domain-containing protein.
     
 0.800
MAN2B1
Alpha-mann_mid domain-containing protein.
     
  0.762
MANBA
Mannosidase beta.
   
 
 0.619
DPP7
Dipeptidyl peptidase 7.
   
 
 0.556
GPR50
G protein-coupled receptor 50; Belongs to the G-protein coupled receptor 1 family.
      
 0.535
TECTB
Tectorin beta.
      
 0.527
NAGA
Alpha-galactosidase.
   
 
 0.523
SIAE
Sialic acid acetylesterase.
    
 
 0.520
GLA
Alpha-galactosidase.
   
 
 0.514
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.