STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R17Protein phosphatase 1 regulatory subunit 17. (161 aa)    
Predicted Functional Partners:
PRKG1
Protein kinase cGMP-dependent 1; Belongs to the protein kinase superfamily.
    
 0.920
PRKG2
cGMP-dependent protein kinase.
    
 0.906
PPP2R1A
Protein phosphatase 2 scaffold subunit Aalpha.
     
  0.791
PPP2R1B
Protein phosphatase 2 scaffold subunit Abeta.
     
  0.791
PPP2CA
Serine/threonine-protein phosphatase.
     
 0.767
G3TWH0_LOXAF
Serine/threonine-protein phosphatase.
     
 0.658
G3U6P2_LOXAF
Metallophos domain-containing protein.
     
 0.658
PPP2CB
Serine/threonine-protein phosphatase.
     
 0.658
STRC
Stereocilin.
      
 0.629
CLRN2
Clarin 2.
      
 0.624
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.