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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF638Zinc finger protein 638. (1972 aa)    
Predicted Functional Partners:
NIPBL
Nipped-B protein.
   
 0.736
U2SURP
U2 snRNP associated SURP domain containing.
   
    0.713
ZNF446
Zinc finger protein 446.
    
 0.659
SENP6
SUMO specific peptidase 6.
   
 
 0.658
DDX27
DEAD-box helicase 27; Belongs to the DEAD box helicase family.
    
 0.642
CELF4
CUGBP Elav-like family member 4.
     
 0.613
RNF123
Ring finger protein 123.
    
 
 0.597
GNL3
G protein nucleolar 3.
    
 
 0.539
CEP250
Centrosomal protein 250.
  
 
 0.527
NCAPG
Non-SMC condensin I complex subunit G.
      
 0.526
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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