STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D4TBC1 domain family member 4. (1137 aa)    
Predicted Functional Partners:
LNPEP
Leucyl and cystinyl aminopeptidase.
     
 0.728
SLC2A4
Solute carrier family 2 member 4; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.662
RAB14
RAB14, member RAS oncogene family.
    
 0.616
RAB10
RAB10, member RAS oncogene family.
    
 0.608
TBC1D21
TBC1 domain family member 21.
      
 0.514
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta; Belongs to the 14-3-3 family.
    
 0.511
RASA1
RAS p21 protein activator 1.
      
 0.473
TBC1D7
TBC1 domain family member 7.
      
 0.452
TBC1D17
TBC1 domain family member 17.
      
 0.447
TBC1D19
TBC1 domain family member 19.
      
 0.443
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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