STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1orf194Chromosome 1 open reading frame 194. (143 aa)    
Predicted Functional Partners:
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.942
RIBC1
RIB43A domain with coiled-coils 1.
   
 
 0.920
PACRG
Parkin coregulated.
   
 
 0.903
NME7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
   
 
 0.900
RIBC2
RIB43A domain with coiled-coils 2.
   
 
 0.887
CFAP126
Cilia and flagella associated protein 126.
   
   0.870
CCDC65
Coiled-coil domain containing 65.
   
 
 0.848
C1orf158
Chromosome 1 open reading frame 158.
   
   0.814
CFAP161
Cilia and flagella associated protein 161.
   
   0.810
ENKUR
Enkurin, TRPC channel interacting protein.
   
   0.810
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.