STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA3GSemaphorin 3G; Belongs to the semaphorin family. (776 aa)    
Predicted Functional Partners:
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.924
SEMA3F
Semaphorin 3F; Belongs to the semaphorin family.
     
  0.849
PLXND1
Plexin D1.
    
 0.806
SEMA3D
Semaphorin 3D; Belongs to the semaphorin family.
     
  0.761
ANGPT1
Angiopoietin 1.
      
 0.692
SEMA3B
Semaphorin 3B; Belongs to the semaphorin family.
    
 
 0.668
BMX
Tyrosine-protein kinase.
    
 0.620
COL12A1
Collagen type XII alpha 1 chain.
      
 0.569
CRIM1
Cysteine rich transmembrane BMP regulator 1.
     
 0.561
P3H2
Prolyl 3-hydroxylase 2.
      
 0.558
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.