STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSME3IP1Family with sequence similarity 192 member A. (255 aa)    
Predicted Functional Partners:
PSME3
Proteasome activator subunit 3.
    
 
 0.941
CACTIN
Uncharacterized protein.
    
 
 0.820
PSMA1
Proteasome subunit alpha type.
   
 
 0.804
GSC
Goosecoid homeobox.
    
   0.790
CDC5L
Cell division cycle 5 like.
   
 
 0.781
RSRP1
Arginine and serine rich protein 1.
    
   0.780
XAB2
XPA binding protein 2.
   
   0.771
PRPF8
Pre-mRNA processing factor 8.
    
   0.761
CMTR2
Cap methyltransferase 2.
      
 0.721
FAM32A
Family with sequence similarity 32 member A.
   
 
 0.720
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.