Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CC2D1BCoiled-coil and C2 domain containing 1B. (855 aa)    
Predicted Functional Partners:
CHMP4C
Charged multivesicular body protein 4C.
    
 0.784
CHMP4B
Charged multivesicular body protein 4B.
    
 0.784
CCDC27
Uncharacterized protein.
    
   0.685
ARHGAP17
Rho GTPase activating protein 17.
      
 0.673
CHMP7
Charged multivesicular body protein 7.
     
 0.664
LOC100655308
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.659
CHMP6
Charged multivesicular body protein 6.
     
 0.650
CHMP2A
Charged multivesicular body protein 2A.
     
 0.646
CSAD
Cysteine sulfinic acid decarboxylase.
      
 0.633
PHGDH
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
      
 0.595
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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