STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSPRY1Ring finger and SPRY domain containing 1. (575 aa)    
Predicted Functional Partners:
GPATCH3
G-patch domain containing 3.
      
 0.695
EAF1
ELL associated factor 1.
      
 0.693
EFCAB1
EF-hand calcium binding domain 1.
      
 0.693
RTCB
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.
 
  
 
 0.666
METTL6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
   
  
 0.645
CCDC106
Coiled-coil domain containing 106.
      
 0.631
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.626
FKBP14
Peptidylprolyl isomerase.
      
 0.618
GARS1
Glycyl-tRNA synthetase.
      
 0.599
PLEKHA8
Pleckstrin homology domain containing A8.
      
 0.596
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.