Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACTR10Actin related protein 10; Belongs to the actin family. (417 aa)    
Predicted Functional Partners:
DCTN5
Dynactin subunit 5.
    
 0.996
DCTN2
Dynactin subunit 2.
   
 0.995
DCTN6
Dynactin subunit 6.
   
 0.995
DCTN4
Dynactin subunit 4.
   
 0.995
DCTN1
CAP-Gly domain-containing protein.
    
 0.993
DCTN3
Dynactin subunit 3.
   
 0.982
ACTR1A
Actin related protein 1A.
   
 0.955
ACTR1B
Actin related protein 1B.
   
 0.955
TUBA8
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.892
TRAK1
Trafficking kinesin protein 1.
     
 0.890
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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