STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID4AAT-rich interaction domain 4A. (1268 aa)    
Predicted Functional Partners:
BRMS1L
BRMS1 like transcriptional repressor.
   
 0.991
BRMS1
BRMS1 transcriptional repressor and anoikis regulator.
   
 0.990
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
   
 0.988
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.988
WDR73
WD repeat domain 73.
   
 0.988
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.988
SAP30
Sin3A associated protein 30.
    
 0.987
SAP30L
SAP30 like.
    
 0.979
SAP18
Histone deacetylase complex subunit SAP18; Component of the SIN3-repressing complex. Enhances the ability of SIN3-HDAC1-mediated transcriptional repression. When tethered to the promoter, it can direct the formation of a repressive complex to core histone proteins. Auxiliary component of the splicing- dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or durin [...]
   
 
 0.969
ACTL6A
Actin like 6A; Belongs to the actin family.
   
 0.962
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.