Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARID4AAT-rich interaction domain 4A. (1268 aa)    
Predicted Functional Partners:
BRMS1
BRMS1 transcriptional repressor and anoikis regulator.
   
 0.993
SAP30
Sin3A associated protein 30.
    
 0.977
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
   
 0.974
SAP30L
SAP30 like.
    
 0.965
ARID4B
AT-rich interaction domain 4B.
   
 0.963
ING2
Inhibitor of growth protein.
   
 0.951
BRMS1L
BRMS1 like transcriptional repressor.
   
 0.950
SINHCAF
SIN3-HDAC complex associated factor.
   
 
 0.939
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.899
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.899
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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