STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM94Transmembrane protein 94. (1343 aa)    
Predicted Functional Partners:
FIBP
FGF1 intracellular binding protein.
    
 
 0.929
CDK5
Cyclin dependent kinase 5; Belongs to the protein kinase superfamily.
    
   0.757
TMEM178A
Transmembrane protein 178A.
      
 0.706
TMEM88
Transmembrane protein 88.
      
 0.654
TMEM97
Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins.
      
 0.643
CASKIN2
CASK interacting protein 2.
   
  
 0.612
TMEM161A
Transmembrane protein 161A.
      
 0.588
MYPN
Myopalladin.
      
 0.565
TMEM47
Transmembrane protein 47.
      
 0.541
DLK1
Delta like non-canonical Notch ligand 1.
    
   0.529
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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