STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CACUL1CDK2 associated cullin domain 1; Belongs to the cullin family. (368 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.944
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.875
RBX1
Ring-box 1.
    
 0.836
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.816
FBXL19
F-box and leucine rich repeat protein 19.
    
 0.774
KDM2B
Lysine demethylase 2B.
    
 0.774
KDM2A
Lysine demethylase 2A.
    
 0.774
GPS1
G protein pathway suppressor 1.
   
 0.753
FBXO9
F-box protein 9.
    
 0.752
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.751
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.