STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACUL1CDK2 associated cullin domain 1; Belongs to the cullin family. (368 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.987
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.879
FBXL19
F-box and leucine rich repeat protein 19.
    
 0.849
KDM2B
Lysine demethylase 2B.
    
 0.849
KDM2A
Lysine demethylase 2A.
    
 0.849
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.832
SKP2
S-phase kinase associated protein 2.
    
 0.825
GPS1
G protein pathway suppressor 1.
    
 0.793
RNF7
Ring finger protein 7.
    
 0.792
RBX1
Ring-box 1.
    
 0.792
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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