Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPACA4Sperm acrosome associated 4. (122 aa)    
Predicted Functional Partners:
SPACA3
Sperm acrosome associated 3; Belongs to the glycosyl hydrolase 22 family.
   
  
 0.784
SPACA1
Sperm acrosome associated 1.
   
  
 0.778
SPACA9
Sperm acrosome associated 9.
      
 0.748
SPATS1
Spermatogenesis associated serine rich 1.
      
 0.671
SPACA6
Uncharacterized protein.
      
 0.668
LYPD4
LY6/PLAUR domain containing 4.
      
 0.592
DCST1
DC-STAMP domain containing 1.
      
 0.566
SYNGR4
Synaptogyrin.
   
  
 0.558
PGAP6
Transmembrane protein 8A.
      
 0.540
SPATA3
Uncharacterized protein.
      
 0.539
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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