STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTCRAUncharacterized protein. (173 aa)    
Predicted Functional Partners:
G3TUP0_LOXAF
Uncharacterized protein.
    
   0.690
KIRREL3
Kirre like nephrin family adhesion molecule 3.
      
 0.567
GP1BA
Glycoprotein Ib platelet subunit alpha.
   
  
 0.548
CD72
CD72 molecule.
      
 0.516
PSMB9
Proteasome subunit beta.
      
 0.509
PSMB10
Proteasome subunit beta 10.
      
 0.509
NAT14
N-acetyltransferase 14 (putative).
  
     0.421
LAG3
Lymphocyte activating 3.
      
 0.415
USP31
Uncharacterized protein.
  
 
   0.403
IKZF1
IKAROS family zinc finger 1.
     
 0.403
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.