STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCM1Pericentriolar material 1. (2061 aa)    
Predicted Functional Partners:
BBS4
Bardet-Biedl syndrome 4.
   
 
 0.966
CEP131
Centrosomal protein 131.
   
 0.963
PLK1
Serine/threonine-protein kinase PLK.
    
 0.940
CEP72
Centrosomal protein 72.
    
 
 0.929
CEP290
Centrosomal protein 290.
   
 
 0.916
OFD1
OFD1 centriole and centriolar satellite protein.
   
 
 0.909
MIB1
Mindbomb E3 ubiquitin protein ligase 1.
    
 0.830
KIAA0753
KIAA0753.
    
 
 0.827
FOPNL
FGFR1OP N-terminal like.
    
 
 0.809
G3SL15_LOXAF
Uncharacterized protein.
   
 0.742
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.