STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3T2H2_LOXAFUncharacterized protein. (298 aa)    
Predicted Functional Partners:
GPAA1
Glycosylphosphatidylinositol anchor attachment 1.
   
 0.921
PIGS
Phosphatidylinositol glycan anchor biosynthesis class S.
   
 0.918
PIGK
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.915
PIGT
Phosphatidylinositol glycan anchor biosynthesis class T.
   
 0.897
PIGO
Phosphatidylinositol glycan anchor biosynthesis class O.
   
 
 0.488
SUSD4
Sushi domain containing 4.
      
 0.470
PIGB
Mannosyltransferase.
    
 
 0.463
PIGC
Phosphatidylinositol glycan anchor biosynthesis class C.
   
  
 0.437
CCDC3
Coiled-coil domain containing 3.
      
 0.430
PIGV
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
 
 0.419
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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