STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH4Cadherin 4; Cadherins are calcium-dependent cell adhesion proteins. (725 aa)    
Predicted Functional Partners:
CTNND1
Catenin delta 1.
    
 0.806
CTNNB1
Catenin beta 1.
   
 0.793
JUP
Junction plakoglobin.
   
 0.707
ARVCF
ARVCF delta catenin family member.
    
 0.645
CTNND2
Catenin delta 2.
    
 0.530
PKP4
Plakophilin 4.
    
 0.530
CDC42
Uncharacterized protein.
    
 0.492
CDH11
Cadherin 11; Cadherins are calcium-dependent cell adhesion proteins.
  
 
0.488
CTNNA2
Uncharacterized protein.
    
 0.483
CTNNA3
Catenin alpha 3.
    
 0.483
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.