STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCB8ATP binding cassette subfamily B member 8. (718 aa)    
Predicted Functional Partners:
CCDC51
Coiled-coil domain containing 51.
    
 0.747
ABCB7
ATP binding cassette subfamily B member 7.
    
0.690
TAPBP
TAP binding protein.
   
 0.518
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.499
TDG
Thymine DNA glycosylase.
      
 0.457
E2F6
E2F transcription factor 6.
    
 
 0.454
SLC25A28
Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.448
KCNJ1
Potassium voltage-gated channel subfamily J member 1.
   
 0.428
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
 0.410
ABCB6
ATP binding cassette subfamily B member 6 (Langereis blood group).
   
0.402
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.