STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCB8ATP binding cassette subfamily B member 8. (718 aa)    
Predicted Functional Partners:
ABCB7
ATP binding cassette subfamily B member 7.
   
 0.828
CCDC51
Coiled-coil domain containing 51.
    
 0.799
TAPBP
TAP binding protein.
   
 0.702
SLC10A2
Solute carrier family 10 member 2.
   
  
 0.607
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.586
SLC25A28
Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.564
TDG
Thymine DNA glycosylase.
      
 0.556
E2F6
E2F transcription factor 6.
    
 
 0.548
MCU
Mitochondrial calcium uniporter.
      
 0.527
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
  
  
 0.523
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.