Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLDN16 | SLC41A1 | ENSLAFP00000006738 | ENSLAFP00000007427 | Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. | Solute carrier family 41 member 1. | 0.517 |
MAGT1 | SLC41A1 | ENSLAFP00000010775 | ENSLAFP00000007427 | Magnesium transporter 1. | Solute carrier family 41 member 1. | 0.542 |
MMGT1 | SLC41A1 | ENSLAFP00000003361 | ENSLAFP00000007427 | Membrane magnesium transporter 1. | Solute carrier family 41 member 1. | 0.515 |
NUCKS1 | PM20D1 | ENSLAFP00000016720 | ENSLAFP00000003547 | Nuclear casein kinase and cyclin dependent kinase substrate 1. | Peptidase M20 domain containing 1. | 0.574 |
NUCKS1 | RAB29 | ENSLAFP00000016720 | ENSLAFP00000016562 | Nuclear casein kinase and cyclin dependent kinase substrate 1. | RAB29, member RAS oncogene family. | 0.826 |
NUCKS1 | SLC41A1 | ENSLAFP00000016720 | ENSLAFP00000007427 | Nuclear casein kinase and cyclin dependent kinase substrate 1. | Solute carrier family 41 member 1. | 0.650 |
NUCKS1 | SLC45A3 | ENSLAFP00000016720 | ENSLAFP00000013468 | Nuclear casein kinase and cyclin dependent kinase substrate 1. | Solute carrier family 45 member 3. | 0.466 |
PM20D1 | NUCKS1 | ENSLAFP00000003547 | ENSLAFP00000016720 | Peptidase M20 domain containing 1. | Nuclear casein kinase and cyclin dependent kinase substrate 1. | 0.574 |
PM20D1 | RAB29 | ENSLAFP00000003547 | ENSLAFP00000016562 | Peptidase M20 domain containing 1. | RAB29, member RAS oncogene family. | 0.570 |
PM20D1 | SLC41A1 | ENSLAFP00000003547 | ENSLAFP00000007427 | Peptidase M20 domain containing 1. | Solute carrier family 41 member 1. | 0.573 |
PM20D1 | SLC45A3 | ENSLAFP00000003547 | ENSLAFP00000013468 | Peptidase M20 domain containing 1. | Solute carrier family 45 member 3. | 0.424 |
RAB29 | NUCKS1 | ENSLAFP00000016562 | ENSLAFP00000016720 | RAB29, member RAS oncogene family. | Nuclear casein kinase and cyclin dependent kinase substrate 1. | 0.826 |
RAB29 | PM20D1 | ENSLAFP00000016562 | ENSLAFP00000003547 | RAB29, member RAS oncogene family. | Peptidase M20 domain containing 1. | 0.570 |
RAB29 | SLC41A1 | ENSLAFP00000016562 | ENSLAFP00000007427 | RAB29, member RAS oncogene family. | Solute carrier family 41 member 1. | 0.582 |
RAB29 | SLC45A3 | ENSLAFP00000016562 | ENSLAFP00000013468 | RAB29, member RAS oncogene family. | Solute carrier family 45 member 3. | 0.415 |
SLC41A1 | CLDN16 | ENSLAFP00000007427 | ENSLAFP00000006738 | Solute carrier family 41 member 1. | Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. | 0.517 |
SLC41A1 | MAGT1 | ENSLAFP00000007427 | ENSLAFP00000010775 | Solute carrier family 41 member 1. | Magnesium transporter 1. | 0.542 |
SLC41A1 | MMGT1 | ENSLAFP00000007427 | ENSLAFP00000003361 | Solute carrier family 41 member 1. | Membrane magnesium transporter 1. | 0.515 |
SLC41A1 | NUCKS1 | ENSLAFP00000007427 | ENSLAFP00000016720 | Solute carrier family 41 member 1. | Nuclear casein kinase and cyclin dependent kinase substrate 1. | 0.650 |
SLC41A1 | PM20D1 | ENSLAFP00000007427 | ENSLAFP00000003547 | Solute carrier family 41 member 1. | Peptidase M20 domain containing 1. | 0.573 |
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