STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETD5SET domain containing 5. (1462 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
   
 0.795
CENPT
Centromere protein T.
    
 0.480
RB1
RB transcriptional corepressor 1.
    
 0.477
AFF4
AF4/FMR2 family member 4.
   
 0.476
EP300
E1A binding protein p300.
   
 0.475
THUMPD3
THUMP domain containing 3.
 
   
 0.465
PEX2
Peroxisomal biogenesis factor 2.
     
 0.461
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
0.441
MEIOB
Meiosis specific with OB-fold.
   
 0.433
HUWE1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
   
 
 0.427
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.