STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAC1Placenta enriched 1. (170 aa)    
Predicted Functional Partners:
ZP3
ZP domain-containing protein.
      
 0.556
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
      
 0.524
KAT5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
   0.516
BRD8
Bromodomain containing 8.
    
   0.491
EPC2
Enhancer of polycomb homolog.
    
   0.489
EP400
E1A binding protein p400.
    
   0.485
MBTD1
Mbt domain containing 1.
    
   0.483
MEAF6
MYST/Esa1 associated factor 6.
    
   0.477
ING3
Inhibitor of growth protein.
    
   0.474
PHF6
PHD finger protein 6.
      
 0.474
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.