STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35F2Solute carrier family 35 member F2. (340 aa)    
Predicted Functional Partners:
BCAR3
BCAR3 adaptor protein, NSP family member.
    
 
 0.535
FNBP1L
Formin binding protein 1 like.
    
 
 0.525
IMMP2L
Uncharacterized protein.
   
  
 0.524
DOP1B
DOP1 leucine zipper like protein B.
      
 0.522
RAB39A
RAB39A, member RAS oncogene family.
    
 
 0.521
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
 
 
 
 0.489
CLDN17
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.470
BICC1
BicC family RNA binding protein 1.
      
 0.451
FREM1
FRAS1 related extracellular matrix 1.
      
 0.441
ATPAF1
ATP synthase mitochondrial F1 complex assembly factor 1.
      
 0.440
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.