STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA16Spermatogenesis associated 16. (569 aa)    
Predicted Functional Partners:
CCDC62
Uncharacterized protein.
      
 0.681
DPY19L1
Dpy-19 like C-mannosyltransferase 1.
      
 0.574
SPEM1
Spermatid maturation 1.
      
 0.532
CABYR
Calcium binding tyrosine phosphorylation regulated.
      
 0.526
SPACA1
Sperm acrosome associated 1.
      
 0.525
SPATA18
Spermatogenesis associated 18.
      
 0.525
SPATA3
Uncharacterized protein.
      
 0.514
ZPBP
Zona pellucida binding protein.
      
 0.514
G3SUK6_LOXAF
Uncharacterized protein.
   
  
 0.481
TSACC
TSSK6 activating cochaperone.
      
 0.457
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.