STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPGRIP1RPGR interacting protein 1. (1293 aa)    
Predicted Functional Partners:
G3UMY7_LOXAF
Uncharacterized protein.
    
 
 0.957
RCC1
Regulator of chromosome condensation 1.
    
 
 0.728
NEK8
NIMA related kinase 8.
    
 
 0.723
NPHP4
Uncharacterized protein.
    
 0.666
G3TXZ7_LOXAF
Uncharacterized protein.
    
 0.666
G3UB36_LOXAF
Uncharacterized protein.
    
 0.666
NPHP1
Nephrocystin 1.
    
 0.650
WHRN
Whirlin.
   
  
 0.649
CEP290
Centrosomal protein 290.
    
 0.639
SPATA7
Spermatogenesis associated 7.
   
 
 0.619
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.