STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL2LHFPL tetraspan subfamily member 2. (228 aa)    
Predicted Functional Partners:
TMEM47
Transmembrane protein 47.
      
 0.555
SYTL2
Synaptotagmin like 2.
   
 
 0.553
TBC1D30
TBC1 domain family member 30.
      
 0.539
OCIAD2
OCIA domain containing 2.
      
 0.502
NRIP3
Nuclear receptor interacting protein 3.
      
 0.493
TMEM86A
Transmembrane protein 86A.
      
 0.442
APLP2
Amyloid beta precursor like protein 2.
     
 0.438
ARHGAP12
Rho GTPase activating protein 12.
      
 0.438
SYTL1
Synaptotagmin like 1.
   
 
 0.403
TMEM51
Transmembrane protein 51.
   
  
 0.400
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.