STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOMApolipoprotein M. (188 aa)    
Predicted Functional Partners:
APOA2
Apolipoprotein A2.
   
 
 0.846
APOH
Apolipoprotein H.
   
 
 0.813
APOC3
Apolipoprotein C3.
   
 
 0.804
APOA4
Apolipoprotein A4.
   
 
 0.719
APOE
Apolipoprotein E.
     
 0.699
GPANK1
G-patch domain and ankyrin repeats 1.
      
 0.649
AHSG
Alpha 2-HS glycoprotein.
   
  
 0.645
APOC2
Apolipoprotein C2.
   
 
 0.622
APOB
Apolipoprotein B.
   
 
 0.612
APOA5
Apolipoprotein A5.
   
 
 0.605
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.