STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLTPPhospholipid transfer protein. (493 aa)    
Predicted Functional Partners:
APOA4
Apolipoprotein A4.
   
 0.886
APOB
Apolipoprotein B.
   
 
 0.744
GDAP1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
   
  
 0.724
UNC5C
Unc-5 netrin receptor C.
      
 0.723
LIPC
Lipase C, hepatic type.
     
 0.676
APOE
Apolipoprotein E.
   
 0.670
APOA2
Apolipoprotein A2.
   
 0.656
TXNIP
Thioredoxin interacting protein.
   
  
 0.648
LCAT
Lecithin-cholesterol acyltransferase.
   
 
 0.639
PON1
Paraoxonase 1.
     
 0.578
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.