STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BANF2Barrier to autointegration factor 2. (90 aa)    
Predicted Functional Partners:
EMD
Emerin.
    
 0.932
LEMD3
LEM domain containing 3.
   
 0.791
LMNA
Lamin A/C; Belongs to the intermediate filament family.
   
 0.780
RBBP9
RB binding protein 9, serine hydrolase.
      
 0.719
SNX6
Sorting nexin; Involved in several stages of intracellular trafficking.
      
 0.649
LMNB2
Lamin B2; Belongs to the intermediate filament family.
   
 0.639
LMNB1
Lamin B1; Belongs to the intermediate filament family.
   
 0.639
RBM23
RNA binding motif protein 23.
   
 0.631
RBM39
RNA binding motif protein 39.
   
 0.631
VRK1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
    
 0.630
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.