STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP16Matrix metallopeptidase 16. (607 aa)    
Predicted Functional Partners:
MMP14
Matrix metallopeptidase 14.
  
  
0.943
MMP24
Matrix metallopeptidase 24.
  
  
 
0.928
HBEGF
Heparin binding EGF like growth factor.
   
 0.918
GNAI2
G protein subunit alpha i2.
     
 0.903
GNAI1
G protein subunit alpha i1.
     
 0.903
GNAI3
G protein subunit alpha i3.
     
 0.903
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.760
MMP13
Matrix metallopeptidase 13.
  
0.676
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 0.658
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.638
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.