STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDSUB1WD repeat, sterile alpha motif and U-box domain containing 1. (476 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.980
TTC37
Tetratricopeptide repeat domain 37.
    
 0.719
BAZ2B
Bromodomain adjacent to zinc finger domain 2B.
 
    
 0.711
SKIV2L
Ski2 like RNA helicase.
    
 0.705
CDC73
Cell division cycle 73.
    
 0.654
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.621
TREH
Trehalase.
      
 0.580
WDR31
WD repeat domain 31.
  
 
 
 0.574
ADSL
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.572
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.541
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.