STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA24Uncharacterized protein. (219 aa)    
Predicted Functional Partners:
NME8
NME/NM23 family member 8.
      
 0.585
ZSCAN2
Zinc finger and SCAN domain containing 2.
      
 0.585
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
      
 0.519
SMNDC1
Survival motor neuron domain containing 1.
      
 0.515
FAM13B
Family with sequence similarity 13 member B.
      
 0.514
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
      
 0.443
CBX1
Chromobox 1.
      
 0.438
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.