STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF367Zinc finger protein 367. (329 aa)    
Predicted Functional Partners:
SGF29
SAGA complex associated factor 29.
    
 
 0.595
AP5S1
Adaptor related protein complex 5 subunit sigma 1.
      
 0.588
MRPS27
Mitochondrial ribosomal protein S27.
    
 0.578
UBOX5
U-box domain containing 5.
     
 0.576
DEPDC1B
DEP domain containing 1B.
   
 
 0.565
RIBC2
RIB43A domain with coiled-coils 2.
    
 0.558
GSTCD
Glutathione S-transferase C-terminal domain containing.
    
 0.546
C18orf54
Chromosome 18 open reading frame 54.
      
 0.542
NEMP1
Nuclear envelope integral membrane protein 1.
      
 0.540
PTPRA
Receptor-type tyrosine-protein phosphatase alpha.
    
 0.528
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.