STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFRP1ADP ribosylation factor related protein 1. (201 aa)    
Predicted Functional Partners:
SYS1
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
   
 
 0.875
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.831
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.808
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.761
VPS53
VPS53 subunit of GARP complex.
     
 0.758
ARL1
ADP ribosylation factor like GTPase 1; Belongs to the small GTPase superfamily. Arf family.
    
0.746
RAB6B
RAB6B, member RAS oncogene family.
    
 0.700
RAB6A
RAB6A, member RAS oncogene family.
    
 0.700
STX16-NPEPL1
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.691
VPS52
VPS52 subunit of GARP complex.
   
 0.682
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.