STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3T6B3_LOXAFUncharacterized protein. (577 aa)    
Predicted Functional Partners:
ACADS
Acyl-CoA dehydrogenase short chain.
 
 
 0.931
ACSM3
Acyl-CoA synthetase medium chain family member 3.
  
 
 
0.906
ACSM1
Uncharacterized protein.
  
  
 
0.902
CS
Citrate synthase; Belongs to the citrate synthase family.
  
 0.717
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 
 0.677
AASDH
Aminoadipate-semialdehyde dehydrogenase.
   
  
 0.531
ACSF2
Acyl-CoA synthetase family member 2.
 
0.523
G3SZF5_LOXAF
Fe-ADH domain-containing protein.
  
 
 0.508
HADHB
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.499
MRTFA
Myocardin related transcription factor A.
  
 
 0.497
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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