STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLTubulin tyrosine ligase. (377 aa)    
Predicted Functional Partners:
EDC3
Enhancer of mRNA decapping 3.
    
 
 0.819
STMN4
Stathmin 4.
    
 
 0.644
LRRC49
Leucine rich repeat containing 49.
   
 0.603
TPGS2
Tubulin polyglutamylase complex subunit 2.
   
 0.578
NICN1
Uncharacterized protein.
   
 0.557
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
  
 0.551
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 0.541
SVBP
Small vasohibin binding protein.
      
 0.540
TTLL4
Tubulin tyrosine ligase like 4.
   
  
0.537
DCP2
Decapping mRNA 2.
    
 
 0.512
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.