STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PER2Period circadian regulator 2. (1252 aa)    
Predicted Functional Partners:
CRY2
Cryptochrome circadian regulator 2.
   
 0.860
CRY1
Cryptochrome circadian regulator 1.
   
 0.852
CLOCK
Clock circadian regulator.
    
 0.825
TIMELESS
Timeless circadian regulator.
   
 0.793
CSNK1D
Casein kinase 1 delta.
    
 0.751
LOC100666300
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.751
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
0.740
G3UCX2_LOXAF
BHLH domain-containing protein.
    
 0.676
NPAS2
Neuronal PAS domain protein 2.
    
 0.663
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
0.637
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.