STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL40Mitochondrial ribosomal protein L40. (206 aa)    
Predicted Functional Partners:
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.994
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.991
MRPL16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.989
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.989
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.986
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.985
G3TR24_LOXAF
Uncharacterized protein.
   
 
 0.985
MRPL36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.984
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.984
MRPL32
Mitochondrial ribosomal protein L32.
   
 
 0.983
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.