STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNMDTenomodulin. (317 aa)    
Predicted Functional Partners:
KERA
Keratocan.
   
 
 0.702
GKN1
Gastrokine 1.
      
 0.624
ITM2B
Integral membrane protein 2B.
      
 0.624
GKN2
Gastrokine 2.
      
 0.624
ITM2C
Integral membrane protein 2C.
      
 0.624
MKX
Mohawk homeobox.
      
 0.581
DCN
Decorin; May affect the rate of fibrils formation.
     
 0.578
FMOD
Fibromodulin.
   
 
 0.556
THBS4
Thrombospondin 4.
   
 
 0.542
TCF15
Transcription factor 15.
      
 0.521
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.