STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPARCL1SPARC like 1. (656 aa)    
Predicted Functional Partners:
IBSP
Integrin binding sialoprotein.
   
  
 0.809
ENAM
Enamelin.
  
   
 0.745
NUDT9
Nudix hydrolase 9.
      
 0.723
AMBN
Uncharacterized protein.
   
  
 0.684
SPP1
Secreted phosphoprotein 1.
      
 0.599
MEPE
Matrix extracellular phosphoglycoprotein.
      
 0.559
PRKG2
cGMP-dependent protein kinase.
      
 0.553
ARHGAP6
Rho GTPase activating protein 6.
      
 0.522
CLEC14A
C-type lectin domain containing 14A.
   
   0.513
MLF1
Myeloid leukemia factor 1.
      
 0.508
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.