STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFOX1RNA binding fox-1 homolog 1. (308 aa)    
Predicted Functional Partners:
RBM24
RNA binding motif protein 24.
  
 
 0.743
ATXN2
Ataxin 2.
    
 
 0.731
QKI
QKI, KH domain containing RNA binding.
   
 
 0.617
RBM38
RNA binding motif protein 38.
   
 
 0.574
RBPMS
RNA binding protein, mRNA processing factor.
   
 
 0.520
ARHGAP15
Rho GTPase activating protein 15.
      
 0.517
MECP2
Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC).
     
 0.517
FHIT
Uncharacterized protein.
      
 0.514
TENM2
Teneurin transmembrane protein 2.
   
  
 0.505
WWOX
Uncharacterized protein.
      
 0.503
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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