STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VWA2Von Willebrand factor A domain containing 2. (759 aa)    
Predicted Functional Partners:
COL6A2
Collagen type VI alpha 2 chain.
   
0.731
G3T5N3_LOXAF
Uncharacterized protein.
   
0.700
COL1A2
Collagen type I alpha 2 chain.
   
 
 0.655
COL1A1
Collagen type I alpha 1 chain.
   
 
 0.613
THAP12
THAP-type domain-containing protein.
    
 0.552
COL3A1
Collagen type III alpha 1 chain.
   
 
 0.544
PPFIA3
PTPRF interacting protein alpha 3.
    
 0.529
GLYCTK
Glycerate kinase.
      
 0.525
RCOR2
REST corepressor 2.
      
 0.525
C9orf116
Chromosome 9 open reading frame 116.
   
   0.517
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.