STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3T8G9_LOXAFUncharacterized protein. (681 aa)    
Predicted Functional Partners:
PMS2
PMS1 homolog 2, mismatch repair system component.
 
    
 0.594
CFAP44
Uncharacterized protein.
   
   0.542
CCDC151
Coiled-coil domain containing 151.
   
    0.542
RABGEF1
Uncharacterized protein.
    
 0.538
CFAP52
Cilia and flagella associated protein 52.
    
 0.489
LRRC23
Leucine rich repeat containing 23.
   
 
 0.448
RSPH14
Uncharacterized protein.
   
 
 0.439
TSNAXIP1
Translin associated factor X interacting protein 1.
   
 
 0.437
ANKRD61
Ankyrin repeat domain 61.
    
 0.423
CCDC65
Coiled-coil domain containing 65.
   
 
 0.417
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.