STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTA1Spectrin alpha, erythrocytic 1. (2392 aa)    
Predicted Functional Partners:
SPTB
Spectrin beta chain; Belongs to the spectrin family.
   
0.967
ITSN2
Intersectin 2.
   
 
 0.948
G3U095_LOXAF
Uncharacterized protein.
   
 
 0.948
SPTAN1
Spectrin alpha, non-erythrocytic 1.
  
  
 
0.929
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
 0.927
RHAG
Rh associated glycoprotein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
  
 0.874
SPTBN1
Spectrin beta chain; Belongs to the spectrin family.
   
0.858
SPTBN2
Spectrin beta chain; Belongs to the spectrin family.
   
0.839
G3TAJ4_LOXAF
Uncharacterized protein.
   
0.759
G3U6K7_LOXAF
PH domain-containing protein.
   
0.759
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.